Building the Future of
Synthetic Biology, Together
We believe in open science and collaborative innovation. Our open-source tools empower researchers worldwide to push the boundaries of biological engineering.
Open Source vs Platform
Our open-source tools provide the foundation. The Avitai platform builds on top with managed infrastructure and biology-specific capabilities.
| Feature | Open Source (Free) | Platform (Contact Us) |
|---|---|---|
| Generative models | Artifex | + Trained biology models |
| Data pipelines | Datarax | + Curated bio datasets |
| Scientific ML | Opifex | + Foundation model access |
| Benchmarking | Calibrax | + Production monitoring |
| Bioinformatics | DiffBio | + End-to-end pipelines |
| Knowledge extraction | Avitai Knowledge | + Curated knowledge graphs |
| Model infrastructure | Playground | + Managed compute + serving |
Our Open Source Projects
Powerful tools for advancing synthetic biology research, from generative modeling to differentiable bioinformatics.
Artifex
Modular Generative Modeling Library
A research-focused modular library for generative models including VAE, GAN, Diffusion, Flow, Energy-Based, and Autoregressive models. Built on JAX/Flax NNX for research and experimentation.
Datarax
Data Pipeline Framework for JAX
An extensible data pipeline framework built for JAX-based ML workflows. JIT-compiled pipelines with DAG execution, differentiable data processing, and multi-device distribution.
Opifex
Scientific Machine Learning Platform
A unified JAX-native platform for scientific machine learning. Neural operators, physics-informed neural networks, and uncertainty quantification for scientific simulations.
Calibrax
Unified Benchmarking Framework
A unified benchmarking framework for the JAX scientific ML ecosystem with profiling, statistical analysis, regression detection, and CI integration.
DiffBio
Differentiable Bioinformatics Pipelines
End-to-end differentiable bioinformatics pipelines built on JAX. Replace discrete operations with differentiable relaxations for gradient-based optimization.
Playground
Proprietary Platform Core
The core infrastructure powering Avitai Bio's foundation models. Experimental environment for cutting-edge biological research.
Avitai Knowledge
Multi-Modal Knowledge Extraction
Extract, structure, and query knowledge from scientific literature, databases, and experimental data. Multi-modal understanding for biology.
Why We Build in the Open
Open source is core to advancing science. Here's why we're committed to it.
Accelerate Research
By sharing tools and methods, we enable the entire research community to move faster and build upon each other's work.
Build Trust
Transparent, reproducible science requires open code. We believe in showing our work and earning trust through openness.
Foster Innovation
Open collaboration brings diverse perspectives and ideas, leading to more robust and innovative solutions.
Join Our Community
Contribute to our projects, report issues, or start discussions. Every contribution helps advance synthetic biology.